first commit

00350378 · Jaime Arias · 00350378 · 00350378 · 00350378 · 00350378
Commit 00350378 authored Dec 03, 2020 by Jaime Arias
--- a/.classpath
+++ b/.classpath
+<?xml version="1.0" encoding="UTF-8"?>
+<classpath>
+	<classpathentry kind="src" output="target/classes" path="src/main/java">
+		<attributes>
+			<attribute name="optional" value="true"/>
+			<attribute name="maven.pomderived" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry excluding="**" kind="src" output="target/classes" path="src/main/resources">
+		<attributes>
+			<attribute name="maven.pomderived" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry excluding="**|target/generated-sources/annotations/|target/generated-sources/test-annotations/" kind="src" output="target/classes" path="target">
+		<attributes>
+			<attribute name="maven.pomderived" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="src" output="target/test-classes" path="src/test/java">
+		<attributes>
+			<attribute name="optional" value="true"/>
+			<attribute name="maven.pomderived" value="true"/>
+			<attribute name="test" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6">
+		<attributes>
+			<attribute name="maven.pomderived" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER">
+		<attributes>
+			<attribute name="maven.pomderived" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="src" path="target/generated-sources/annotations">
+		<attributes>
+			<attribute name="optional" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="src" output="target/test-classes" path="target/generated-sources/test-annotations">
+		<attributes>
+			<attribute name="optional" value="true"/>
+			<attribute name="test" value="true"/>
+		</attributes>
+	</classpathentry>
+	<classpathentry kind="output" path="target/classes"/>
+</classpath>
--- a/.devcontainer/devcontainer.json
+++ b/.devcontainer/devcontainer.json
+{
+	"name": "Alligator",
+	"image": "alligator:dev",
+
+	// Set *default* container specific settings.json values on container create.
+	"settings": {
+		"terminal.integrated.shell.linux": "/bin/bash"
+	},
+
+	// Add the IDs of extensions you want installed when the container is created.
+	"extensions": [
+		"vscjava.vscode-java-pack"
+	],
+
+	// Use 'forwardPorts' to make a list of ports inside the container available locally.
+	"forwardPorts": [9000],
+
+	// Comment out connect as root instead. More info: https://aka.ms/vscode-remote/containers/non-root.
+	// "remoteUser": "vscode"
+}
--- a/.factorypath
+++ b/.factorypath
--- a/.gitignore
+++ b/.gitignore
+
+# Created by https://www.toptal.com/developers/gitignore/api/eclipse,maven,java
+# Edit at https://www.toptal.com/developers/gitignore?templates=eclipse,maven,java
+
+### Eclipse ###
+.metadata
+bin/
+tmp/
+*.tmp
+*.bak
+*.swp
+*~.nib
+local.properties
+.settings/
+.loadpath
+.recommenders
+
+# External tool builders
+.externalToolBuilders/
+
+# Locally stored "Eclipse launch configurations"
+*.launch
+
+# PyDev specific (Python IDE for Eclipse)
+*.pydevproject
+
+# CDT-specific (C/C++ Development Tooling)
+.cproject
+
+# CDT- autotools
+.autotools
+
+# Java annotation processor (APT)
+.factorypath
+
+# PDT-specific (PHP Development Tools)
+.buildpath
+
+# sbteclipse plugin
+.target
+
+# Tern plugin
+.tern-project
+
+# TeXlipse plugin
+.texlipse
+
+# STS (Spring Tool Suite)
+.springBeans
+
+# Code Recommenders
+.recommenders/
+
+# Annotation Processing
+.apt_generated/
+.apt_generated_test/
+
+# Scala IDE specific (Scala & Java development for Eclipse)
+.cache-main
+.scala_dependencies
+.worksheet
+
+# Uncomment this line if you wish to ignore the project description file.
+# Typically, this file would be tracked if it contains build/dependency configurations:
+#.project
+
+### Eclipse Patch ###
+# Spring Boot Tooling
+.sts4-cache/
+
+### Java ###
+# Compiled class file
+*.class
+
+# Log file
+*.log
+
+# BlueJ files
+*.ctxt
+
+# Mobile Tools for Java (J2ME)
+.mtj.tmp/
+
+# Package Files #
+*.jar
+*.war
+*.nar
+*.ear
+*.zip
+*.tar.gz
+*.rar
+
+# virtual machine crash logs, see http://www.java.com/en/download/help/error_hotspot.xml
+hs_err_pid*
+
+### Maven ###
+target/
+pom.xml.tag
+pom.xml.releaseBackup
+pom.xml.versionsBackup
+pom.xml.next
+release.properties
+dependency-reduced-pom.xml
+buildNumber.properties
+.mvn/timing.properties
+# https://github.com/takari/maven-wrapper#usage-without-binary-jar
+.mvn/wrapper/maven-wrapper.jar
+
+# End of https://www.toptal.com/developers/gitignore/api/eclipse,maven,java
+
+
--- a/.project
+++ b/.project
+<?xml version="1.0" encoding="UTF-8"?>
+<projectDescription>
+	<name>adt2amas</name>
+	<comment></comment>
+	<projects>
+	</projects>
+	<buildSpec>
+		<buildCommand>
+			<name>org.eclipse.jdt.core.javabuilder</name>
+			<arguments>
+			</arguments>
+		</buildCommand>
+		<buildCommand>
+			<name>org.eclipse.m2e.core.maven2Builder</name>
+			<arguments>
+			</arguments>
+		</buildCommand>
+	</buildSpec>
+	<natures>
+		<nature>org.eclipse.jdt.core.javanature</nature>
+		<nature>org.eclipse.m2e.core.maven2Nature</nature>
+	</natures>
+	<filteredResources>
+		<filter>
+			<id>1605682696592</id>
+			<name></name>
+			<type>30</type>
+			<matcher>
+				<id>org.eclipse.core.resources.regexFilterMatcher</id>
+				<arguments>node_modules|.git|__CREATED_BY_JAVA_LANGUAGE_SERVER__</arguments>
+			</matcher>
+		</filter>
+	</filteredResources>
+</projectDescription>
--- a/.settings/org.eclipse.core.resources.prefs
+++ b/.settings/org.eclipse.core.resources.prefs
+eclipse.preferences.version=1
+encoding//src/main/java=UTF-8
+encoding//src/main/resources=UTF-8
+encoding//target/generated-sources=UTF-8
+encoding/<project>=UTF-8
+encoding/target=UTF-8
--- a/.settings/org.eclipse.jdt.apt.core.prefs
+++ b/.settings/org.eclipse.jdt.apt.core.prefs
+eclipse.preferences.version=1
+org.eclipse.jdt.apt.aptEnabled=true
+org.eclipse.jdt.apt.genSrcDir=target/generated-sources/annotations
+org.eclipse.jdt.apt.genTestSrcDir=target/generated-sources/test-annotations
--- a/.settings/org.eclipse.jdt.core.prefs
+++ b/.settings/org.eclipse.jdt.core.prefs
+eclipse.preferences.version=1
+org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.6
+org.eclipse.jdt.core.compiler.compliance=1.6
+org.eclipse.jdt.core.compiler.problem.enablePreviewFeatures=disabled
+org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning
+org.eclipse.jdt.core.compiler.problem.reportPreviewFeatures=ignore
+org.eclipse.jdt.core.compiler.processAnnotations=enabled
+org.eclipse.jdt.core.compiler.release=disabled
+org.eclipse.jdt.core.compiler.source=1.6
--- a/.settings/org.eclipse.m2e.core.prefs
+++ b/.settings/org.eclipse.m2e.core.prefs
+activeProfiles=
+eclipse.preferences.version=1
+resolveWorkspaceProjects=true
+version=1
--- a/.vscode/settings.json
+++ b/.vscode/settings.json
+{
+  "java.configuration.updateBuildConfiguration": "automatic"
+}
\ No newline at end of file
--- a/.vscode/tasks.json
+++ b/.vscode/tasks.json
+{
+  // See https://go.microsoft.com/fwlink/?LinkId=733558
+  // for the documentation about the tasks.json format
+  "version": "2.0.0",
+  "tasks": [
+    {
+      "label": "Build Service",
+      "type": "shell",
+      "command": "mvn clean && mvn install",
+      "options": {
+        "cwd": "${workspaceFolder}"
+      },
+      "presentation": {
+        "reveal": "silent"
+      }
+    },
+    {
+      "label": "Create Release",
+      "type": "shell",
+      "command": "mv adt2amas-0.3.2-Linux-x86_64.jar adt2amas-0.3.2.jar",
+      "options": {
+        "cwd": "${env:HOME}/.m2/repository/org/cosyverif/service/adt2amas/0.3.2"
+      },
+      "presentation": {
+        "reveal": "silent"
+      }
+    },
+    {
+      "label": "Build Alligator",
+      "type": "shell",
+      "command": "mvn -f pom-service.xml clean && mvn -f pom-service.xml package",
+      "options": {
+        "cwd": "/alligator/bundle"
+      },
+      "presentation": {
+        "reveal": "silent"
+      }
+    },
+    {
+      "label": "Build",
+      "dependsOrder": "sequence",
+      "dependsOn": [
+        "Build Service",
+        "Create Release",
+        "Build Alligator"
+      ],
+    },
+    {
+      "label": "Run Alligator",
+      "type": "shell",
+      "command": "./alligatord start",
+      "options": {
+        "cwd": "/alligator/bundle/target/alligator-bundle/alligator"
+      },
+      "dependsOn": [
+        "Build"
+      ]
+    }
+  ]
+}
--- a/README.md
+++ b/README.md
+# adt2amas Service
+
+# Dependencies
+
+- maven
+
+# Compilation
+
+- `mvn compile`
+
+# Installation
+
+- `mvn install`
+
+# Development
+
+You can use the
+[Alligator](https://depot.lipn.univ-paris13.fr/cosyverif/alligator/alligator)
+Docker image as development environment.
+
+To run tests you can use the tool [soapui](https://www.soapui.org/). An
+example is shown below:
+
+
+```xml
+<soapenv:Envelope xmlns:soapenv="http://schemas.xmlsoap.org/soap/envelope/" xmlns:all="http://alligator.cosyverif.org/">
+  <soapenv:Header/>
+  <soapenv:Body>
+    <all:asynchronous-call xmlns:ns2="http://alligator.cosyverif.org/" xmlns:ns3="http://cosyverif.org/ns/model" xmlns:ns4="http://cosyverif.org/ns/formalism">
+      <service>
+        <authors>
+          <authors>Jaime Arias</authors>
+          <authors>Laure Petrucci</authors>
+        </authors>
+        <help>Computes the minimal attack time using minimal number of agents for a given attack-defence tree</help>
+        <identifier>org.cosyverif.service.adt2amas.MinimalScheduling</identifier>
+        <isOldService>false</isOldService>
+        <keywords/>
+        <name>Minimal Schedule with Minimal Number of Agents in Attack-Defence Trees</name>
+        <parameters>
+          <parameters xsi:type="ns2:modelParameter" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
+            <name>Model parameter</name>
+            <shortname/>
+            <help>Attack-Defence Tree model</help>
+            <direction>IN</direction>
+            <editable>false</editable>
+            <formalism>
+              <formalism>http://formalisms.cosyverif.org/adtree.fml</formalism>
+            </formalism>
+            <model formalismUrl="adtree.fml"
+                  xmlns="http://cosyverif.org/ns/model">
+
+              <!-- root gate -->
+              <attribute name="root">9</attribute>
+
+              <!-- ================================================ -->
+              <!-- Leaves                                           -->
+              <!-- ================================================ -->
+
+              <!-- bribe gatekeeper (leaf b) -->
+              <node id="1" nodeType="leaf">
+                <attribute name="name">bribe gatekeeper</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">500</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">60</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- force arm. door (leaf f) -->
+              <node id="2" nodeType="leaf">
+                <attribute name="name">force arm. door</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">100</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">120</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- helicopter (leaf h) -->
+              <node id="3" nodeType="leaf">
+                <attribute name="name">helicopter</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">500</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">3</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- emergency exit (leaf e) -->
+              <node id="4" nodeType="leaf">
+                <attribute name="name">emergency exit</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">10</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- police (leaf p) -->
+              <node id="5" nodeType="leaf">
+                <attribute name="name">police</attribute>
+                <attribute name="role">DEFENCE</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">100</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">10</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- ================================================ -->
+              <!-- Gates                                            -->
+              <!-- ================================================ -->
+
+              <!-- steal treasure (ST) -->
+              <node id="6" nodeType="AND">
+                <attribute name="name">steal treasure</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">2</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- get away (GA) -->
+              <node id="7" nodeType="OR">
+                <attribute name="name">get away</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- thieves fleeing (TF) -->
+              <node id="8" nodeType="SAND">
+                <attribute name="name">thieves fleeing</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- treasure stolen (TS) -->
+              <node id="9" nodeType="CAND">
+                <attribute name="name">treasure stolen</attribute>
+                <attribute name="role">ATTACK</attribute>
+                <attribute name="attributes">
+                  <attribute name="attribute">
+                    <attribute name="name">cost</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                  <attribute name="attribute">
+                    <attribute name="name">time</attribute>
+                    <attribute name="value">0</attribute>
+                  </attribute>
+                </attribute>
+              </node>
+
+              <!-- ================================================ -->
+              <!-- Arcs                                             -->
+              <!-- ================================================ -->
+
+              <arc id="10" arcType="arc" source="6" target="1"/> <!-- ST->b -->
+              <arc id="11" arcType="arc" source="6" target="2"/> <!-- ST->f -->
+
+              <arc id="12" arcType="arc" source="7" target="3"/> <!-- GA->h -->
+              <arc id="13" arcType="arc" source="7" target="4"/> <!-- GA->e -->
+
+              <arc id="14" arcType="arc" source="8" target="6"/> <!-- TF->ST -->
+              <arc id="15" arcType="arc" source="8" target="7"/> <!-- TF->GA -->
+
+              <arc id="16" arcType="arc" source="9" target="8"/> <!-- TS->TF -->
+              <arc id="17" arcType="arc" source="9" target="5"/> <!-- TS->p -->
+            </model>
+          </parameters>
+          <parameters xsi:type="ns2:multipleLineTextParameter" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
+            <name>Scheduling Table</name>
+            <shortname/>
+            <help>String parameter help message.</help>
+            <direction>OUT</direction>
+            <editable>false</editable>
+            <defaultValue/>
+            <value/>
+          </parameters>
+        </parameters>
+        <shortname/>
+        <tool>adt2amas</tool>
+        <version>0.1</version>
+      </service>
+    </all:asynchronous-call>
+  </soapenv:Body>
+</soapenv:Envelope>
+```
--- a/pom.xml
+++ b/pom.xml
+<?xml version="1.0" encoding="UTF-8"?>
+
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+  xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+  <modelVersion>4.0.0</modelVersion>
+
+  <parent>
+    <groupId>org.cosyverif.service</groupId>
+    <artifactId>project-base</artifactId>
+    <version>0.3.2</version>
+  </parent>
+
+  <name>Services of adt2amas</name>
+  <artifactId>adt2amas</artifactId>
+  <version>0.3.2</version>
+  <description>Services available through the adt2amas tool.</description>
+  <packaging>jar</packaging>
+
+  <url>https://depot.lipn.univ-paris13.fr/cosyverif/services/service-adt2amas</url>
+
+  <properties>
+    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+    <toolDir>${project.build.directory}/generated-sources/tools/linux</toolDir>
+  </properties>
+
+  <dependencies>
+    <dependency>
+      <groupId>junit</groupId>
+      <artifactId>junit</artifactId>
+      <version>4.11</version>
+      <scope>test</scope>
+    </dependency>
+
+    <dependency>
+      <groupId>org.projectlombok</groupId>
+      <artifactId>lombok</artifactId>
+      <version>RELEASE</version>
+    </dependency>
+
+    <dependency>
+      <groupId>fr.lip6.move.grml</groupId>
+      <artifactId>grml-helpers</artifactId>
+      <version>LATEST</version>
+    </dependency>
+  </dependencies>
+
+  <build>
+    <plugins>
+      <plugin>
+        <groupId>org.apache.maven.plugins</groupId>
+        <artifactId>maven-antrun-plugin</artifactId>
+        <version>3.0.0</version>
+        <executions>
+          <execution>
+              <phase>generate-resources</phase>
+              <configuration>
+                <target>
+                    <echo message="unzipping adt2amas binaries" />
+                    <unzip src="${toolDir}/linux-x86_64.zip" dest="${toolDir}/">
+                      <patternset>
+                        <include name="**/adt2amas"/>
+                      </patternset>
+                      <mapper type="flatten"/>
+                    </unzip>
+                </target>
+              </configuration>
+              <goals>
+                <goal>run</goal>
+              </goals>
+          </execution>
+        </executions>
+      </plugin>
+    </plugins>
+  </build>
+
+</project>
--- a/src/main/java/org/cosyverif/service/adt2amas/GrmlParser.java
+++ b/src/main/java/org/cosyverif/service/adt2amas/GrmlParser.java